A python implementation of the hypothesis-free multiple scan statistic with variable window for detecting clusters in point processes (L. Cucala. A hypothesis-free multiple scan statistic with variable window. Biom. J., 50 (2008), pp. 299-310).
Install¶
pip install hfscanstat
How to use¶
Using example data from Knox, G. (1959). Secular pattern of congenital oesophageal atresia. British Journal of Preventive Social Medecine 13, 222–226.
knox_1959 = [170, 316, 445, 468, 938, 1034, 1128, 1233, 1248, 1249,
1252, 1259, 1267, 1305, 1385, 1388, 1390, 1446, 1454,
1458, 1461, 1491, 1583, 1699, 1702, 1787, 1924, 1974,
2049, 2051, 2067, 2075, 2108, 2151, 2174, 2191]
clusters = get_clusters(knox_1959)
print(clusters)